WormBase Tree Display for Variation: WBVar00088775
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| WBVar00088775 | Evidence | Paper_evidence | WBPaper00019534 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Public_name | ma164 | |||||||
| Other_name | CE27771:p.Arg183Ter | ||||||||
| R186.4.1:c.547C>T | |||||||||
| HGVSg | CHROMOSOME_V:g.12969889C>T | ||||||||
| Sequence_details | SMap | S_parent | Sequence | R186 | |||||
| Flanking_sequences | atttctcaagttgaaatctacaagaaacca | gagtatgtgttctatcaattggaagtgacc | |||||||
| Mapping_target | R186 | ||||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00013416 | ||||
| SeqStatus | Sequenced | ||||||||
| Variation_type | Allele | ||||||||
| Origin | Species | Caenorhabditis elegans | |||||||
| Strain | WBStrain00026482 | ||||||||
| WBStrain00040214 | |||||||||
| WBStrain00040225 | |||||||||
| WBStrain00040230 | |||||||||
| Laboratory | VT | ||||||||
| Status | Live | ||||||||
| Affects | Gene | WBGene00003031 | |||||||
| Transcript | R186.4.1 | VEP_consequence | stop_gained | ||||||
| VEP_impact | HIGH | ||||||||
| HGVSc | R186.4.1:c.547C>T | ||||||||
| HGVSp | CE27771:p.Arg183Ter | ||||||||
| cDNA_position | 583 | ||||||||
| CDS_position | 547 | ||||||||
| Protein_position | 183 | ||||||||
| Exon_number | 5/7 | ||||||||
| Codon_change | Cga/Tga | ||||||||
| Amino_acid_change | R/* | ||||||||
| Interactor | WBInteraction000500712 | ||||||||
| WBInteraction000517227 | |||||||||
| Genetics | Interpolated_map_position | V | 4.77379 | ||||||
| Description | Phenotype_not_observed | WBPhenotype:0002524 | Paper_evidence | WBPaper00056452 | |||||
| Curator_confirmed | WBPerson10390 | ||||||||
| Remark | Not larval lethal when grown on Moco(molybdenum cofactor)-deficient bacteria | Paper_evidence | WBPaper00056452 | ||||||
| Curator_confirmed | WBPerson10390 | ||||||||
| Progeny do not display embryonic lethality when parents are deprived of dietary Moco (molybdenum cofactor) | Paper_evidence | WBPaper00056452 | |||||||
| Curator_confirmed | WBPerson10390 | ||||||||
| EQ_annotations | Molecule_affected | WBMol:00002069 | PATO:0001997 | Paper_evidence | WBPaper00056452 | ||||
| Curator_confirmed | WBPerson10390 | ||||||||
| Phenotype_assay | Treatment | Animals grown on Moco (molybdenum cofactor)-deficient bacteria | Paper_evidence | WBPaper00056452 | |||||
| Curator_confirmed | WBPerson10390 | ||||||||
| Reference | WBPaper00013416 | ||||||||
| WBPaper00019534 | |||||||||
| WBPaper00046295 | |||||||||
| WBPaper00056452 | |||||||||
| Method | Substitution_allele |
