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WormBase Tree Display for Variation: WBVar00088713

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Name Class

WBVar00088713EvidencePaper_evidenceWBPaper00002589
NamePublic_namem592
Other_nameC05D2.1b.1:c.1022G>A
C05D2.1c.2:c.1223G>A
CE32114:p.Arg408Lys
CE51327:p.Arg539Lys
C05D2.1a.1:c.1679G>A
C05D2.1e.1:c.1616G>A
C05D2.1c.1:c.1223G>A
CE51404:p.Arg341Lys
C05D2.1c.3:c.1223G>A
CE16827:p.Arg560Lys
HGVSgCHROMOSOME_III:g.5630820G>A
Sequence_detailsSMapS_parentSequenceC05D2
Flanking_sequencestggtgagcaagaaggaacgaccacaatggaagatgagattattaaacatgaatatatgag
Mapping_targetC05D2
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00023888
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00030737
WBStrain00030749
WBStrain00030752
WBStrain00030757
WBStrain00030758
LaboratoryDR
StatusLive
AffectsGeneWBGene00000900
TranscriptC05D2.1e.1 (12)
C05D2.1c.1 (12)
C05D2.1b.1 (12)
C05D2.1c.2 (12)
C05D2.1c.3 (12)
C05D2.1a.1 (12)
InteractorWBInteraction000555972
GeneticsInterpolated_map_positionIII-1.46753
DescriptionPhenotypeWBPhenotype:0000229Paper_evidenceWBPaper00002374
Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPerson551
Remarkts for SmaPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
Temperature_sensitiveHeat_sensitivePerson_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000296Paper_evidenceWBPaper00003626
Curator_confirmedWBPerson37
Remarkm592 phenotype is temperature sensitive, temperature critical period late L3/early L4Paper_evidenceWBPaper00003626
Curator_confirmedWBPerson37
Temperature_sensitiveHeat_sensitive25Paper_evidenceWBPaper00003626
Curator_confirmedWBPerson37
WBPhenotype:0000297Paper_evidenceWBPaper00002374
Curator_confirmedWBPerson551
RemarkTable 1Paper_evidenceWBPaper00002374
Curator_confirmedWBPerson551
Temperature_sensitiveHeat_sensitive25Paper_evidenceWBPaper00002374
Curator_confirmedWBPerson551
WBPhenotype:0001690Paper_evidenceWBPaper00002589
Curator_confirmedWBPerson712
RemarkAnimals bind mAb M37 at stages L1-L4 but not as adults, wildtype worms only bind this anti-body at the L1 stage. Animals in dauer stage do not bind mAb 37, similar to wildtype.Paper_evidenceWBPaper00002589
Curator_confirmedWBPerson712
PenetranceIncomplete80%Paper_evidenceWBPaper00002589
Curator_confirmedWBPerson712
Temperature_sensitiveHeat_sensitive25CPaper_evidenceWBPaper00002589
Curator_confirmedWBPerson712
Phenotype_assayTemperature25Paper_evidenceWBPaper00002589
Curator_confirmedWBPerson712
ReferenceWBPaper00002589
WBPaper00002374
WBPaper00003626
MethodSubstitution_allele