WormBase Tree Display for Variation: WBVar00088333

WBVar00088333 Evidence: Paper_evidence: WBPaper00003386
  Name: Public_name: ku194
    Other_name (17)
    HGVSg: CHROMOSOME_X:g.5672291C>T
  Sequence_details: SMap: S_parent: Sequence: W01C8
    Flanking_sequences: ctcctgaggcagcacgaactgatgcagcat agcagcaacaaatgataattgctaacatgt
    Mapping_target: W01C8
    Type_of_mutation: Substitution: c t Paper_evidence: WBPaper00003386
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00026510
    Laboratory: MH
    Status: Live
  Affects: Gene: WBGene00001182
    Transcript (11)
    Interactor: WBInteraction000501481
      WBInteraction000501482
      WBInteraction000501869
      WBInteraction000520308
      WBInteraction000555306
  Genetics: Interpolated_map_position: X -4.407
  Description: Phenotype (13)
    Phenotype_not_observed: WBPhenotype:0000197 Paper_evidence: WBPaper00003386
        Curator_confirmed: WBPerson712
        Remark: pi cell precursors adopt a pi fate, as assayed by their division patterns (56/63 cells lineaged) and the expression of pi-cell specific markers lin-11::gfp and cog-2::gfp in ku194 animals. Paper_evidence: WBPaper00003386
            Curator_confirmed: WBPerson712
        Variation_effect: Probable_null_via_phenotype: Paper_evidence: WBPaper00003386
            Curator_confirmed: WBPerson712
        EQ_annotations: Anatomy_term: WBbt:0007813 PATO:0000460 Paper_evidence: WBPaper00003386
                Curator_confirmed: WBPerson712
      WBPhenotype:0001414 Paper_evidence: WBPaper00003386
        Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000056 PATO:0000460 Paper_evidence: WBPaper00003386
                Curator_confirmed: WBPerson712
  Reference: WBPaper00042395
    WBPaper00003386
    WBPaper00006298
  Method: Substitution_allele