WormBase Tree Display for Variation: WBVar00088316
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| WBVar00088316 | Evidence | Paper_evidence | WBPaper00004407 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | ku78 | |||||
| Other_name | CE05975:p.Lys1018Ter | ||||||
| F56H9.5.1:c.3052A>T | |||||||
| HGVSg | CHROMOSOME_V:g.12656504A>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | W05B10 | |||
| Flanking_sequences | gatccagcttttgttgaacgtcttaacctg | aagaagtaaaagctcctgaaccagaagatc | |||||
| Mapping_target | W05B10 | ||||||
| Type_of_mutation | Substitution | a | t | Paper_evidence | WBPaper00004407 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | MH | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003011 | |||||
| Transcript | F56H9.5.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F56H9.5.1:c.3052A>T | ||||||
| HGVSp | CE05975:p.Lys1018Ter | ||||||
| cDNA_position | 3084 | ||||||
| CDS_position | 3052 | ||||||
| Protein_position | 1018 | ||||||
| Exon_number | 13/15 | ||||||
| Codon_change | Aaa/Taa | ||||||
| Amino_acid_change | K/* | ||||||
| Genetics | Interpolated_map_position | V | 4.60272 | ||||
| Reference | WBPaper00004407 | ||||||
| Method | Substitution_allele |
