WormBase Tree Display for Variation: WBVar00088135
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WBVar00088135 | Evidence | Paper_evidence | WBPaper00003843 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | ju1 | ||||||
Other_name | CE27606:p.Trp30Ter | |||||||
Y37E11AR.6a.1:c.90G>A | ||||||||
HGVSg | CHROMOSOME_IV:g.3766731C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | W07G9 | ||||
Flanking_sequences | ttccgccaaacggttaccgcaaatctactg | aactctacaaatcccctgtaagttgacttt | ||||||
Mapping_target | W07G9 | |||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00003843 | |||
SeqStatus | Sequenced | |||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00005375 | |||||||
WBStrain00005393 | ||||||||
WBStrain00008621 | ||||||||
Laboratory | CZ | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006869 | ||||||
Transcript | Y37E11AR.6a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y37E11AR.6a.1:c.90G>A | |||||||
HGVSp | CE27606:p.Trp30Ter | |||||||
cDNA_position | 96 | |||||||
CDS_position | 90 | |||||||
Protein_position | 30 | |||||||
Exon_number | 2/6 | |||||||
Codon_change | tgG/tgA | |||||||
Amino_acid_change | W/* | |||||||
Interactor | WBInteraction000503639 | |||||||
Genetics | Interpolated_map_position | IV | -2.28971 | |||||
Description | Phenotype | WBPhenotype:0000379 | Paper_evidence | WBPaper00005631 | ||||
Curator_confirmed | WBPerson557 | |||||||
Penetrance | Incomplete | Paper_evidence | WBPaper00005631 | |||||
Curator_confirmed | WBPerson557 | |||||||
Reference | WBPaper00003843 | |||||||
WBPaper00005631 | ||||||||
Method | Substitution_allele |