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WormBase Tree Display for Variation: WBVar00088135

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Name Class

WBVar00088135EvidencePaper_evidenceWBPaper00003843
NamePublic_nameju1
Other_nameCE27606:p.Trp30Ter
Y37E11AR.6a.1:c.90G>A
HGVSgCHROMOSOME_IV:g.3766731C>T
Sequence_detailsSMapS_parentSequenceW07G9
Flanking_sequencesttccgccaaacggttaccgcaaatctactgaactctacaaatcccctgtaagttgacttt
Mapping_targetW07G9
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00003843
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00005375
WBStrain00005393
WBStrain00008621
LaboratoryCZ
StatusLive
AffectsGeneWBGene00006869
TranscriptY37E11AR.6a.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScY37E11AR.6a.1:c.90G>A
HGVSpCE27606:p.Trp30Ter
cDNA_position96
CDS_position90
Protein_position30
Exon_number2/6
Codon_changetgG/tgA
Amino_acid_changeW/*
InteractorWBInteraction000503639
GeneticsInterpolated_map_positionIV-2.28971
DescriptionPhenotypeWBPhenotype:0000379Paper_evidenceWBPaper00005631
Curator_confirmedWBPerson557
PenetranceIncompletePaper_evidenceWBPaper00005631
Curator_confirmedWBPerson557
ReferenceWBPaper00003843
WBPaper00005631
MethodSubstitution_allele