WormBase Tree Display for Variation: WBVar00088066
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WBVar00088066 | Evidence | Person_evidence | WBPerson713 | ||
---|---|---|---|---|---|
Name | Public_name | je6 | |||
Other_name | C15F1.5b.1:c.663+157C>A | ||||
C15F1.14:n.159G>T | |||||
C15F1.5a.1:c.873+157C>A | |||||
C15F1.9:n.9C>A | |||||
C15F1.10:n.2C>A | |||||
HGVSg | CHROMOSOME_II:g.6968550G>T | ||||
Sequence_details | SMap | S_parent | Sequence | C15F1 | |
Flanking_sequences | ggccccccttcactatagctcataaactta | ctggctgggggtatctcgtgatcatgaaga | |||
Mapping_target | C15F1 | ||||
Type_of_mutation | Substitution | c | a | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00023447 | ||||
WBStrain00023449 | |||||
Laboratory | JW | ||||
Status | Live | ||||
Affects | Gene | WBGene00077724 | |||
WBGene00198924 | |||||
WBGene00006344 | |||||
WBGene00015796 | |||||
Transcript | C15F1.5a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C15F1.5a.1:c.873+157C>A | ||||
Intron_number | 8/11 | ||||
C15F1.14 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C15F1.14:n.159G>T | ||||
cDNA_position | 159 | ||||
Exon_number | 1/1 | ||||
C15F1.5b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C15F1.5b.1:c.663+157C>A | ||||
Intron_number | 5/7 | ||||
C15F1.9 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C15F1.9:n.9C>A | ||||
cDNA_position | 9 | ||||
Exon_number | 1/1 | ||||
C15F1.10 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C15F1.10:n.2C>A | ||||
cDNA_position | 2 | ||||
Exon_number | 1/1 | ||||
Genetics | Interpolated_map_position | II | 0.198865 | ||
Reference | WBPaper00010922 | ||||
Remark | This point mutation is compensatory to 5' splice site mutation in unc-73(e936). | Person_evidence | WBPerson713 | ||
Method | Substitution_allele |