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WormBase Tree Display for Variation: WBVar00088031

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Name Class

WBVar00088031EvidencePaper_evidenceWBPaper00003944
NamePublic_nameit75
Other_nameCE27410:p.Trp374Ter
Y59A8B.14c.1:c.1110G>A
CE46081:p.Trp370Ter
Y59A8B.14a.1:c.1122G>A
Y59A8B.14b.1:c.699G>A
CE46046:p.Trp233Ter
HGVSgCHROMOSOME_V:g.18104227G>A
Sequence_detailsSMapS_parentSequenceY37H2A
Flanking_sequencestttttccagtggctacaaagcggatatgtgagtgcaggtgtcaccctgtacaacctggtt
Mapping_targetY37H2A
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00003944
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryKK
StatusLive
AffectsGeneWBGene00003919
TranscriptY59A8B.14a.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScY59A8B.14a.1:c.1122G>A
HGVSpCE27410:p.Trp374Ter
cDNA_position1122
CDS_position1122
Protein_position374
Exon_number8/11
Codon_changetgG/tgA
Amino_acid_changeW/*
Y59A8B.14b.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScY59A8B.14b.1:c.699G>A
HGVSpCE46046:p.Trp233Ter
cDNA_position699
CDS_position699
Protein_position233
Exon_number5/8
Codon_changetgG/tgA
Amino_acid_changeW/*
Y59A8B.14c.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScY59A8B.14c.1:c.1110G>A
HGVSpCE46081:p.Trp370Ter
cDNA_position1110
CDS_position1110
Protein_position370
Exon_number8/11
Codon_changetgG/tgA
Amino_acid_changeW/*
InteractorWBInteraction000523981
GeneticsInterpolated_map_positionV14.1065
DescriptionPhenotypeWBPhenotype:0000050Paper_evidenceWBPaper00032251
Curator_confirmedWBPerson2987
RemarkTable S4Paper_evidenceWBPaper00032251
Curator_confirmedWBPerson2987
PenetranceComplete100Paper_evidenceWBPaper00032251
Curator_confirmedWBPerson2987
ReferenceWBPaper00003944
WBPaper00032251
MethodSubstitution_allele