WormBase Tree Display for Variation: WBVar00087945
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| WBVar00087945 | Evidence | Person_evidence | WBPerson295 | ||
|---|---|---|---|---|---|
| Name | Public_name | hx542 | |||
| Other_name | CE43431:p.Pro842Ser | ||||
| B0334.8a.1:c.2524C>T | |||||
| HGVSg | CHROMOSOME_II:g.11523674G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y62F5A | |
| Flanking_sequences | attagtcataaaatggaaaatatggattct | cactggatcctgtgtacaaactgggtgaaa | |||
| Mapping_target | Y62F5A | ||||
| Type_of_mutation | Substitution | c | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00034897 | ||||
| WBStrain00034905 | |||||
| Laboratory | MK | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00000090 | |||
| Transcript | B0334.8a.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | B0334.8a.1:c.2524C>T | ||||
| HGVSp | CE43431:p.Pro842Ser | ||||
| cDNA_position | 2524 | ||||
| CDS_position | 2524 | ||||
| Protein_position | 842 | ||||
| Exon_number | 5/10 | ||||
| Codon_change | Cca/Tca | ||||
| Amino_acid_change | P/S | ||||
| Genetics | Interpolated_map_position | II | 3.61257 | ||
| Reference | WBPaper00022775 | ||||
| WBPaper00021113 | |||||
| WBPaper00016508 | |||||
| WBPaper00017159 | |||||
| WBPaper00001985 | |||||
| WBPaper00016507 | |||||
| Method | Substitution_allele |
