WormBase Tree Display for Variation: WBVar00087834
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WBVar00087834 | Evidence | Paper_evidence | WBPaper00005276 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | hc190 | |||||
Other_name | Y66D12A.20.1:c.36+1G>A | ||||||
HGVSg | CHROMOSOME_III:g.11505590G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | Y66D12A | |||
Flanking_sequences | gagcaacgcgattctcgtggaatgccacag | taagacgtttttgaaggtttaacagcatgc | |||||
Mapping_target | Y66D12A | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00005276 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | BA | ||||||
Author | Paul Muhlrad | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00004960 | |||||
Transcript | Y66D12A.20.1 | VEP_consequence | splice_donor_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | Y66D12A.20.1:c.36+1G>A | ||||||
Intron_number | 2/7 | ||||||
Interactor | WBInteraction000052256 | ||||||
WBInteraction000052257 | |||||||
WBInteraction000052402 | |||||||
WBInteraction000052421 | |||||||
Isolation | Mutagen | EMS | Paper_evidence | WBPaper00005276 | |||
Genetics | Interpolated_map_position | III | 10.4953 | ||||
Description | Phenotype | WBPhenotype:0000670 | Person_evidence | WBPerson438 | |||
Curator_confirmed | WBPerson48 | ||||||
Remark | precocious spermiogenesis initiation | Person_evidence | WBPerson438 | ||||
Curator_confirmed | WBPerson48 | ||||||
WBPhenotype:0001384 | Person_evidence | WBPerson438 | |||||
Curator_confirmed | WBPerson48 | ||||||
Reference | WBPaper00005276 | ||||||
Method | Substitution_allele |