WormBase Tree Display for Variation: WBVar00087779
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WBVar00087779 | Evidence | Paper_evidence | WBPaper00003351 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | hc78 | |||||
Other_name | CE06618:p.Ser177Phe | ||||||
ZK524.1.1:c.530C>T | |||||||
HGVSg | CHROMOSOME_I:g.7455668C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | ZK524 | |||
Flanking_sequences | tattcgttgtcacaaactgttctcttatct | cgttttctacctacgagtttttccaagcaa | |||||
Mapping_target | ZK524 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00003351 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000381 | ||||||
WBStrain00000393 | |||||||
Laboratory | BA | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00004958 | |||||
Transcript | ZK524.1.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
HGVSc | ZK524.1.1:c.530C>T | ||||||
HGVSp | CE06618:p.Ser177Phe | ||||||
cDNA_position | 584 | ||||||
CDS_position | 530 | ||||||
Protein_position | 177 | ||||||
Exon_number | 4/10 | ||||||
Codon_change | tCc/tTc | ||||||
Amino_acid_change | S/F | ||||||
Genetics | Interpolated_map_position | I | 2.09272 | ||||
Mapping_data | In_multi_point | 2043 | |||||
2045 | |||||||
In_pos_neg_data | 5962 | ||||||
Description | Phenotype (12) | ||||||
Reference | WBPaper00001612 | ||||||
WBPaper00022503 | |||||||
WBPaper00001075 | |||||||
Method | Substitution_allele |