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WormBase Tree Display for Variation: WBVar00087199

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Name Class

WBVar00087199NamePublic_nameWBVar00087199
Other_namehaw111559
B0395.3.3:c.165+8T>A
B0395.3.2:c.165+8T>A
B0395.3.1:c.165+8T>A
HGVSgCHROMOSOME_X:g.16039004A>T
Sequence_detailsSMapS_parentSequenceB0395
Flanking_sequencestgttttgctccaaatgttttttttttttttacctgttttgtctcttgaaa
Mapping_targetB0395
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
StatusLive
AffectsGeneWBGene00007175
TranscriptB0395.3.3VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScB0395.3.3:c.165+8T>A
Intron_number4/13
B0395.3.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScB0395.3.1:c.165+8T>A
Intron_number3/12
B0395.3.2VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScB0395.3.2:c.165+8T>A
Intron_number3/12
Remark[20081124 db] this Variation was previously named hw111559
MethodWGS_Hawaiian_Waterston