WormBase Tree Display for Variation: WBVar00084154
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WBVar00084154 | Name | Public_name | WBVar00084154 | ||
---|---|---|---|---|---|
Other_name | pas28705 | ||||
haw108514 | |||||
cewivar00116087 | |||||
C29F7.6b.1:c.130-73T>A | |||||
C29F7.6a.1:c.1402-73T>A | |||||
HGVSg | CHROMOSOME_X:g.13439900T>A | ||||
Sequence_details | SMap | S_parent | Sequence | C29F7 | |
Flanking_sequences | aacttcagcattttccaacagaaaa | aattaattcatgaaattcattattt | |||
Mapping_target | C29F7 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
Million_mutation_project_reanalysis | |||||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00216929 | |||
Status | Live | ||||
Affects | Gene | WBGene00007813 | |||
Transcript | C29F7.6b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C29F7.6b.1:c.130-73T>A | ||||
Intron_number | 1/3 | ||||
C29F7.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C29F7.6a.1:c.1402-73T>A | ||||
Intron_number | 5/8 | ||||
Remark | [20081124 db] this Variation was previously named hw108514 | ||||
Method | WGS_Hawaiian_Waterston |