WormBase Tree Display for Variation: WBVar00083810
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| WBVar00083810 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00083810 | |||
| Other_name | haw108170 | ||||
| cewivar00276470 | |||||
| F11C1.5e.1:c.2838A>G | |||||
| F11C1.5a.1:c.2838A>G | |||||
| CE48441:p.Arg946= | |||||
| CE41311:p.Arg946= | |||||
| F11C1.5a.2:c.2838A>G | |||||
| HGVSg | CHROMOSOME_X:g.12995662A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F11C1 | |
| Flanking_sequences | cggatcccctaccagaagtttgtcg | aatgtgtttgactttgattcataca | |||
| Mapping_target | F11C1 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| WBStrain00031279 | From_analysis | WGS_Andersen | |||
| WBStrain00031284 | From_analysis | WGS_Andersen | |||
| Laboratory | RW | ||||
| QX | |||||
| Person | WBPerson1562 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01471876 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00008694 | |||
| Transcript | F11C1.5e.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F11C1.5e.1:c.2838A>G | ||||
| HGVSp | CE48441:p.Arg946= | ||||
| cDNA_position | 2867 | ||||
| CDS_position | 2838 | ||||
| Protein_position | 946 | ||||
| Exon_number | 13/14 | ||||
| Codon_change | cgA/cgG | ||||
| Amino_acid_change | R | ||||
| F11C1.5a.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F11C1.5a.2:c.2838A>G | ||||
| HGVSp | CE41311:p.Arg946= | ||||
| cDNA_position | 2848 | ||||
| CDS_position | 2838 | ||||
| Protein_position | 946 | ||||
| Exon_number | 13/30 | ||||
| Codon_change | cgA/cgG | ||||
| Amino_acid_change | R | ||||
| F11C1.5a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F11C1.5a.1:c.2838A>G | ||||
| HGVSp | CE41311:p.Arg946= | ||||
| cDNA_position | 2861 | ||||
| CDS_position | 2838 | ||||
| Protein_position | 946 | ||||
| Exon_number | 13/30 | ||||
| Codon_change | cgA/cgG | ||||
| Amino_acid_change | R | ||||
| Reference | WBPaper00040707 | ||||
| Remark | [20081124 db] this Variation was previously named hw108170 | ||||
| Method | WGS_Hawaiian_Waterston |
