WormBase Tree Display for Variation: WBVar00083779
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WBVar00083779 | Name | Public_name | WBVar00083779 | ||
---|---|---|---|---|---|
Other_name | haw108139 | ||||
cewivar00276415 | |||||
F11C1.5a.2:c.879G>A | |||||
CE41311:p.Leu293= | |||||
F11C1.5e.1:c.879G>A | |||||
CE48441:p.Leu293= | |||||
F11C1.5a.1:c.879G>A | |||||
HGVSg | CHROMOSOME_X:g.12992802G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F11C1 | |
Flanking_sequences | gcacagctgtcgtagagaatacatt | aagatttgggtaagtgtacactatt | |||
Mapping_target | F11C1 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008694 | |||
Transcript | F11C1.5e.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F11C1.5e.1:c.879G>A | ||||
HGVSp | CE48441:p.Leu293= | ||||
cDNA_position | 908 | ||||
CDS_position | 879 | ||||
Protein_position | 293 | ||||
Exon_number | 5/14 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
F11C1.5a.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F11C1.5a.2:c.879G>A | ||||
HGVSp | CE41311:p.Leu293= | ||||
cDNA_position | 889 | ||||
CDS_position | 879 | ||||
Protein_position | 293 | ||||
Exon_number | 5/30 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
F11C1.5a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F11C1.5a.1:c.879G>A | ||||
HGVSp | CE41311:p.Leu293= | ||||
cDNA_position | 902 | ||||
CDS_position | 879 | ||||
Protein_position | 293 | ||||
Exon_number | 5/30 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw108139 | ||||
Method | WGS_Hawaiian_Waterston |