WormBase Tree Display for Variation: WBVar00083607
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WBVar00083607 | Name | Public_name | WBVar00083607 | ||
---|---|---|---|---|---|
Other_name | haw107967 | ||||
cewivar00276298 | |||||
R09A8.1b.1:c.477G>A | |||||
CE53101:p.Ala159= | |||||
R09A8.1a.1:c.2010G>A | |||||
CE53061:p.Ala670= | |||||
HGVSg | CHROMOSOME_X:g.12616383G>A | ||||
Sequence_details | SMap | S_parent | Sequence | R09A8 | |
Flanking_sequences | aaccgatgaaaaaggaggccggagc | ttgcttccccctcgagcggttgtctataagctccctgcaatcaagggctcaatgaaagatgcaat | |||
Mapping_target | R09A8 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00011152 | |||
Transcript | R09A8.1a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | R09A8.1a.1:c.2010G>A | ||||
HGVSp | CE53061:p.Ala670= | ||||
cDNA_position | 2020 | ||||
CDS_position | 2010 | ||||
Protein_position | 670 | ||||
Exon_number | 11/15 | ||||
Codon_change | gcG/gcA | ||||
Amino_acid_change | A | ||||
R09A8.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | R09A8.1b.1:c.477G>A | ||||
HGVSp | CE53101:p.Ala159= | ||||
cDNA_position | 477 | ||||
CDS_position | 477 | ||||
Protein_position | 159 | ||||
Exon_number | 4/7 | ||||
Codon_change | gcG/gcA | ||||
Amino_acid_change | A | ||||
Remark | [20081124 db] this Variation was previously named hw107967 | ||||
Method | WGS_Hawaiian_Waterston |