WormBase Tree Display for Variation: WBVar00083043
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WBVar00083043 | Name | Public_name | WBVar00083043 | ||
---|---|---|---|---|---|
Other_name | haw107403 | ||||
cewivar00275877 | |||||
F13D2.1b.1:c.4302T>C | |||||
CE47830:p.Cys1434= | |||||
CE47903:p.Cys1412= | |||||
F13D2.1a.1:c.4236T>C | |||||
HGVSg | CHROMOSOME_X:g.11165200A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C05C9 | |
Flanking_sequences | tagattcgcttaatgcaactttgta | caaagtgtttgatttgacacgatgt | |||
Mapping_target | C05C9 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008735 | |||
Transcript | F13D2.1b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F13D2.1b.1:c.4302T>C | ||||
HGVSp | CE47830:p.Cys1434= | ||||
cDNA_position | 4353 | ||||
CDS_position | 4302 | ||||
Protein_position | 1434 | ||||
Exon_number | 34/39 | ||||
Codon_change | tgT/tgC | ||||
Amino_acid_change | C | ||||
F13D2.1a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F13D2.1a.1:c.4236T>C | ||||
HGVSp | CE47903:p.Cys1412= | ||||
cDNA_position | 4236 | ||||
CDS_position | 4236 | ||||
Protein_position | 1412 | ||||
Exon_number | 33/38 | ||||
Codon_change | tgT/tgC | ||||
Amino_acid_change | C | ||||
Remark | [20081124 db] this Variation was previously named hw107403 | ||||
Method | WGS_Hawaiian_Waterston |