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WormBase Tree Display for Variation: WBVar00082099

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Name Class

WBVar00082099EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00082099
Other_namehaw106459
cewivar00128463
ZC506.4c.1:c.1223+114C>A
ZC506.4a.1:c.1214+114C>A
ZC506.7:n.84G>T
ZC506.4d.1:c.956+114C>A
ZC506.4b.1:c.1181+114C>A
HGVSgCHROMOSOME_X:g.9971537G>T
Sequence_detailsSMapS_parentSequenceZC506
Flanking_sequencescaagaatttttaagaaaatgcggttttccaaatccagatccagaaaatta
Mapping_targetZC506
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (74)
LaboratoryRW
QX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01470662
StatusLive
AffectsGeneWBGene00003232
WBGene00199118
TranscriptZC506.7VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScZC506.7:n.84G>T
cDNA_position84
Exon_number1/1
ZC506.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZC506.4c.1:c.1223+114C>A
Intron_number10/19
ZC506.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZC506.4d.1:c.956+114C>A
Intron_number6/15
ZC506.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZC506.4a.1:c.1214+114C>A
Intron_number11/21
ZC506.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScZC506.4b.1:c.1181+114C>A
Intron_number9/18
ReferenceWBPaper00040707
Remark[20081124 db] this Variation was previously named hw106459
MethodWGS_Hawaiian_Waterston