WormBase Tree Display for Variation: WBVar00082099
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WBVar00082099 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00082099 | |||
Other_name | haw106459 | ||||
cewivar00128463 | |||||
ZC506.4c.1:c.1223+114C>A | |||||
ZC506.4a.1:c.1214+114C>A | |||||
ZC506.7:n.84G>T | |||||
ZC506.4d.1:c.956+114C>A | |||||
ZC506.4b.1:c.1181+114C>A | |||||
HGVSg | CHROMOSOME_X:g.9971537G>T | ||||
Sequence_details | SMap | S_parent | Sequence | ZC506 | |
Flanking_sequences | caagaatttttaagaaaatgcggtt | ttccaaatccagatccagaaaatta | |||
Mapping_target | ZC506 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (74) | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01470662 | |||
Status | Live | ||||
Affects | Gene | WBGene00003232 | |||
WBGene00199118 | |||||
Transcript | ZC506.7 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZC506.7:n.84G>T | ||||
cDNA_position | 84 | ||||
Exon_number | 1/1 | ||||
ZC506.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC506.4c.1:c.1223+114C>A | ||||
Intron_number | 10/19 | ||||
ZC506.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC506.4d.1:c.956+114C>A | ||||
Intron_number | 6/15 | ||||
ZC506.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC506.4a.1:c.1214+114C>A | ||||
Intron_number | 11/21 | ||||
ZC506.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC506.4b.1:c.1181+114C>A | ||||
Intron_number | 9/18 | ||||
Reference | WBPaper00040707 | ||||
Remark | [20081124 db] this Variation was previously named hw106459 | ||||
Method | WGS_Hawaiian_Waterston |