WormBase Tree Display for Variation: WBVar00081797
expand all nodes | collapse all nodes | view schema
WBVar00081797 | Name | Public_name | WBVar00081797 | ||
---|---|---|---|---|---|
Other_name | haw106157 | ||||
cewivar00060235 | |||||
B0563.6b.1:c.85+561T>A | |||||
B0563.6c.1:c.112+561T>A | |||||
B0563.6a.1:c.112+561T>A | |||||
B0563.6b.2:c.85+561T>A | |||||
HGVSg | CHROMOSOME_X:g.9141092T>A | ||||
Sequence_details | SMap | S_parent | Sequence | B0563 | |
Flanking_sequences | aaataccataattaatattgcaatc | attaaaaagtcttcaaaaatcttgt | |||
Mapping_target | B0563 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (37) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00015263 | |||
Transcript | B0563.6a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | B0563.6a.1:c.112+561T>A | ||||
Intron_number | 3/8 | ||||
B0563.6b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0563.6b.2:c.85+561T>A | ||||
Intron_number | 3/8 | ||||
B0563.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0563.6b.1:c.85+561T>A | ||||
Intron_number | 2/7 | ||||
B0563.6c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0563.6c.1:c.112+561T>A | ||||
Intron_number | 2/8 | ||||
Remark | [20081124 db] this Variation was previously named hw106157 | ||||
Method | WGS_Hawaiian_Waterston |