WormBase Tree Display for Variation: WBVar00081332
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| WBVar00081332 | Name | Public_name | WBVar00081332 | ||
|---|---|---|---|---|---|
| Other_name | haw105692 | ||||
| cewivar00275003 | |||||
| CE53371:p.Leu90Ter | |||||
| F18E9.8b.1:c.269T>G | |||||
| F18E9.8a.3:c.*189T>G | |||||
| HGVSg | CHROMOSOME_X:g.8578590A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F18E9 | |
| Flanking_sequences | tttttacaggttcttcttcttcaat | aattgtattttctgcatgtttggga | |||
| Mapping_target | F18E9 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00044780 | |||
| Transcript | F18E9.8a.3 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F18E9.8a.3:c.*189T>G | ||||
| cDNA_position | 1132 | ||||
| Exon_number | 6/6 | ||||
| F18E9.8b.1 | VEP_consequence | stop_gained | |||
| VEP_impact | HIGH | ||||
| HGVSc | F18E9.8b.1:c.269T>G | ||||
| HGVSp | CE53371:p.Leu90Ter | ||||
| cDNA_position | 269 | ||||
| CDS_position | 269 | ||||
| Protein_position | 90 | ||||
| Exon_number | 2/2 | ||||
| Codon_change | tTa/tGa | ||||
| Amino_acid_change | L/* | ||||
| Remark | [20081124 db] this Variation was previously named hw105692 | ||||
| Method | WGS_Hawaiian_Waterston |
