WormBase Tree Display for Variation: WBVar00081139
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WBVar00081139 | Name | Public_name | WBVar00081139 | ||
---|---|---|---|---|---|
Other_name | pas4111 | ||||
haw105499 | |||||
cewivar00059131 | |||||
C17H11.6c.1:c.62+252T>A | |||||
C17H11.6c.2:c.62+252T>A | |||||
C17H11.6c.3:c.62+252T>A | |||||
C17H11.6d.1:c.407+252T>A | |||||
HGVSg | CHROMOSOME_X:g.8194400A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C17H11 | |
Flanking_sequences | aatctaaaaatcttccacaaatttt | tattacaaaaaaaaatttttattac | |||
Mapping_target | C17H11 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (35) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
History | Acquires_merge | WBVar00099252 | |||
Status | Live | ||||
Affects | Gene | WBGene00015926 | |||
Transcript | C17H11.6c.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6c.3:c.62+252T>A | ||||
Intron_number | 3/17 | ||||
C17H11.6c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6c.1:c.62+252T>A | ||||
Intron_number | 2/16 | ||||
C17H11.6d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6d.1:c.407+252T>A | ||||
Intron_number | 3/16 | ||||
C17H11.6c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C17H11.6c.2:c.62+252T>A | ||||
Intron_number | 4/18 | ||||
Remark | [20081124 db] this Variation was previously named hw105499 | ||||
Method | WGS_Hawaiian_Waterston |