WormBase Tree Display for Variation: WBVar00080653
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WBVar00080653 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00080653 | |||
Other_name | haw105013 | ||||
cewivar00274605 | |||||
C53C9.3a.1:c.41+4461C>A | |||||
C53C9.3d.1:c.41+4461C>A | |||||
C53C9.3c.1:c.41+4461C>A | |||||
HGVSg | CHROMOSOME_X:g.7702585G>T | ||||
Sequence_details | SMap | S_parent | Sequence | C53C9 | |
Flanking_sequences | aattcggaagttagttttaagaatt | ttaagctgattctttccagaaactg | |||
Mapping_target | C53C9 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
WBStrain00005835 | From_analysis | WGS_Andersen | |||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01469812 | |||
Status | Live | ||||
Affects | Gene | WBGene00002242 | |||
Transcript | C53C9.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C53C9.3c.1:c.41+4461C>A | ||||
Intron_number | 1/13 | ||||
C53C9.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C53C9.3d.1:c.41+4461C>A | ||||
Intron_number | 2/14 | ||||
C53C9.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C53C9.3a.1:c.41+4461C>A | ||||
Intron_number | 2/13 | ||||
Reference | WBPaper00040707 | ||||
Remark | [20081124 db] this Variation was previously named hw105013 | ||||
Method | WGS_Hawaiian_Waterston |