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WormBase Tree Display for Variation: WBVar00080653

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Name Class

WBVar00080653EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00080653
Other_namehaw105013
cewivar00274605
C53C9.3a.1:c.41+4461C>A
C53C9.3d.1:c.41+4461C>A
C53C9.3c.1:c.41+4461C>A
HGVSgCHROMOSOME_X:g.7702585G>T
Sequence_detailsSMapS_parentSequenceC53C9
Flanking_sequencesaattcggaagttagttttaagaattttaagctgattctttccagaaactg
Mapping_targetC53C9
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
WBStrain00005835From_analysisWGS_Andersen
LaboratoryRW
QX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01469812
StatusLive
AffectsGeneWBGene00002242
TranscriptC53C9.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53C9.3c.1:c.41+4461C>A
Intron_number1/13
C53C9.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53C9.3d.1:c.41+4461C>A
Intron_number2/14
C53C9.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53C9.3a.1:c.41+4461C>A
Intron_number2/13
ReferenceWBPaper00040707
Remark[20081124 db] this Variation was previously named hw105013
MethodWGS_Hawaiian_Waterston