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WormBase Tree Display for Variation: WBVar00080652

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Name Class

WBVar00080652NamePublic_nameWBVar00080652
Other_namehaw105012
cewivar00274604
C53C9.3a.1:c.42-1922T>A
C53C9.3c.1:c.42-1922T>A
C53C9.3d.1:c.42-1922T>A
HGVSgCHROMOSOME_X:g.7698443A>T
Sequence_detailsSMapS_parentSequenceC53C9
Flanking_sequencesaggaatccagagagttttattcttattttttttaaatgcaattggtcaaa
Mapping_targetC53C9
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00002242
TranscriptC53C9.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53C9.3c.1:c.42-1922T>A
Intron_number1/13
C53C9.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53C9.3d.1:c.42-1922T>A
Intron_number2/14
C53C9.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC53C9.3a.1:c.42-1922T>A
Intron_number2/13
Remark[20081124 db] this Variation was previously named hw105012
MethodWGS_Hawaiian_Waterston