WormBase Tree Display for Variation: WBVar00080652
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WBVar00080652 | Name | Public_name | WBVar00080652 | ||
---|---|---|---|---|---|
Other_name | haw105012 | ||||
cewivar00274604 | |||||
C53C9.3a.1:c.42-1922T>A | |||||
C53C9.3c.1:c.42-1922T>A | |||||
C53C9.3d.1:c.42-1922T>A | |||||
HGVSg | CHROMOSOME_X:g.7698443A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C53C9 | |
Flanking_sequences | aggaatccagagagttttattctta | ttttttttaaatgcaattggtcaaa | |||
Mapping_target | C53C9 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00002242 | |||
Transcript | C53C9.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C53C9.3c.1:c.42-1922T>A | ||||
Intron_number | 1/13 | ||||
C53C9.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C53C9.3d.1:c.42-1922T>A | ||||
Intron_number | 2/14 | ||||
C53C9.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C53C9.3a.1:c.42-1922T>A | ||||
Intron_number | 2/13 | ||||
Remark | [20081124 db] this Variation was previously named hw105012 | ||||
Method | WGS_Hawaiian_Waterston |