WormBase Tree Display for Variation: WBVar00080590
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| WBVar00080590 | Name | Public_name | WBVar00080590 | ||
|---|---|---|---|---|---|
| Other_name | haw104950 | ||||
| cewivar00274565 | |||||
| C44E12.3e.1:c.295+1143A>T | |||||
| C44E12.3d.1:c.295+1143A>T | |||||
| C44E12.3g.1:c.104-1337A>T | |||||
| C44E12.3f.1:c.104-1337A>T | |||||
| C44E12.3c.1:c.295+1143A>T | |||||
| C44E12.3b.1:c.104-1337A>T | |||||
| HGVSg | CHROMOSOME_X:g.7604959T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C44E12 | |
| Flanking_sequences | tttttgcactgggtatcgagtaggt | ccaattttgagtttctatgtagtca | |||
| Mapping_target | C44E12 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006671 | |||
| Transcript | C44E12.3d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C44E12.3d.1:c.295+1143A>T | ||||
| Intron_number | 2/12 | ||||
| C44E12.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C44E12.3b.1:c.104-1337A>T | ||||
| Intron_number | 1/10 | ||||
| C44E12.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C44E12.3c.1:c.295+1143A>T | ||||
| Intron_number | 1/11 | ||||
| C44E12.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C44E12.3f.1:c.104-1337A>T | ||||
| Intron_number | 2/13 | ||||
| C44E12.3g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C44E12.3g.1:c.104-1337A>T | ||||
| Intron_number | 1/11 | ||||
| C44E12.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C44E12.3e.1:c.295+1143A>T | ||||
| Intron_number | 1/10 | ||||
| Remark | [20081124 db] this Variation was previously named hw104950 | ||||
| Method | WGS_Hawaiian_Waterston |
