WormBase Tree Display for Variation: WBVar00079514
expand all nodes | collapse all nodes | view schema
WBVar00079514 | Name | Public_name | WBVar00079514 | ||
---|---|---|---|---|---|
Other_name | haw103874 | ||||
cewivar00056341 | |||||
R07E4.1a.1:c.122+265T>C | |||||
R07E4.1b.1:c.-311T>C | |||||
HGVSg | CHROMOSOME_X:g.5959501T>C | ||||
Sequence_details | SMap | S_parent | Sequence | R07E4 | |
Flanking_sequences | caaacagagctaaacatctgttttg | tctgactgaagatttgttactacgc | |||
Mapping_target | R07E4 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (35) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00019935 | |||
Transcript | R07E4.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R07E4.1a.1:c.122+265T>C | ||||
Intron_number | 1/22 | ||||
R07E4.1b.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R07E4.1b.1:c.-311T>C | ||||
cDNA_position | 4 | ||||
Exon_number | 1/24 | ||||
Remark | [20081124 db] this Variation was previously named hw103874 | ||||
Method | WGS_Hawaiian_Waterston |