WormBase Tree Display for Variation: WBVar00079106

WBVar00079106 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00079106
    Other_name: snp_C25F6[1]
      haw103466
      cewivar00126690
      C25F6.4.1:c.*187T>C
      C25F6.30:n.180T>C
    HGVSg: CHROMOSOME_X:g.5466250T>C
  Sequence_details: SMap: S_parent: Sequence: C25F6
    Flanking_sequences: cgaactgaaaaaaagatgagatagt gaagaggtgacaaggacattgtcaa
    Mapping_target: C25F6
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (12)
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00243352
    Status: Live
  Affects: Gene: WBGene00016104
      WBGene00219831
    Transcript: C25F6.4.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C25F6.4.1:c.*187T>C
        cDNA_position: 2514
        Exon_number: 17/17
      C25F6.30 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: C25F6.30:n.180T>C
        cDNA_position: 180
        Exon_number: 1/1
  Reference: WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw103466
  Method: WGS_Hawaiian_Waterston