WormBase Tree Display for Variation: WBVar00078851
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WBVar00078851 | Name | Public_name | WBVar00078851 | ||
---|---|---|---|---|---|
Other_name | haw103211 | ||||
cewivar00126308 | |||||
H28G03.6.1:c.498G>A | |||||
CE35733:p.Leu166= | |||||
HGVSg | CHROMOSOME_X:g.5242139C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y34B4A | |
Flanking_sequences | gtgatattggaatcaactcaaatcc | aattctacatgtaacgttttcgttc | |||
Mapping_target | Y34B4A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (12) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00003477 | |||
Transcript | H28G03.6.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | H28G03.6.1:c.498G>A | ||||
HGVSp | CE35733:p.Leu166= | ||||
cDNA_position | 517 | ||||
CDS_position | 498 | ||||
Protein_position | 166 | ||||
Exon_number | 4/23 | ||||
Codon_change | ttG/ttA | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw103211 | ||||
Method | WGS_Hawaiian_Waterston |