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WormBase Tree Display for Variation: WBVar00078625

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Name Class

WBVar00078625NamePublic_nameWBVar00078625
Other_namehaw102985
cewivar00126032
C31H2.3.1:c.88+162T>C
C31H2.3.2:c.88+162T>C
HGVSgCHROMOSOME_X:g.5152823A>G
Sequence_detailsSMapS_parentSequenceC31H2
Flanking_sequencescctatgtgatattctgttagaagaacaaacaagcagttgtgaaggcagcg
Mapping_targetC31H2
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00016293
TranscriptC31H2.3.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC31H2.3.2:c.88+162T>C
Intron_number4/7
C31H2.3.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC31H2.3.1:c.88+162T>C
Intron_number2/5
Remark[20081124 db] this Variation was previously named hw102985
MethodWGS_Hawaiian_Waterston