WormBase Tree Display for Variation: WBVar00078416

WBVar00078416 Name: Public_name: WBVar00078416
    Other_name: haw102776
      cewivar00273355
      K05B2.5c.1:c.77-1302A>T
      K05B2.5b.1:c.77-1302A>T
      K05B2.5a.1:c.-89-1302A>T
    HGVSg: CHROMOSOME_X:g.4928234T>A
  Sequence_details: SMap: S_parent: Sequence: K05B2
    Flanking_sequences: tctctgataataaaattaaatacgc ttgttgtacagccatcaaaattttc
    Mapping_target: K05B2
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00003986
    Transcript: K05B2.5c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K05B2.5c.1:c.77-1302A>T
        Intron_number: 1/12
      K05B2.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K05B2.5b.1:c.77-1302A>T
        Intron_number: 1/14
      K05B2.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K05B2.5a.1:c.-89-1302A>T
        Intron_number: 1/14
  Remark: [20081124 db] this Variation was previously named hw102776
  Method: WGS_Hawaiian_Waterston