WormBase Tree Display for Variation: WBVar00077848
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WBVar00077848 | Name | Public_name | WBVar00077848 | ||
---|---|---|---|---|---|
Other_name | haw102208 | ||||
cewivar00272710 | |||||
D1079.1a.1:c.68+975A>T | |||||
D1079.1d.1:c.68+975A>T | |||||
D1079.1c.1:c.68+975A>T | |||||
D1079.1b.1:c.68+975A>T | |||||
HGVSg | CHROMOSOME_X:g.4404257A>T | ||||
Sequence_details | SMap | S_parent | Sequence | D1079 | |
Flanking_sequences | catatacttgctcttttatacctaa | atgaccaaacactgtcggaggttgt | |||
Mapping_target | D1079 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00017040 | |||
Transcript | D1079.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | D1079.1a.1:c.68+975A>T | ||||
Intron_number | 2/8 | ||||
D1079.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | D1079.1d.1:c.68+975A>T | ||||
Intron_number | 1/7 | ||||
D1079.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | D1079.1b.1:c.68+975A>T | ||||
Intron_number | 2/9 | ||||
D1079.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | D1079.1c.1:c.68+975A>T | ||||
Intron_number | 2/10 | ||||
Remark | [20081124 db] this Variation was previously named hw102208 | ||||
Method | WGS_Hawaiian_Waterston |