WormBase Tree Display for Variation: WBVar00077633
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WBVar00077633 | Name | Public_name | WBVar00077633 | ||
---|---|---|---|---|---|
Other_name | haw101993 | ||||
cewivar00272449 | |||||
W01H2.3c.1:c.57+1557C>A | |||||
W01H2.3a.2:c.-4+1557C>A | |||||
W01H2.3a.1:c.-4+1157C>A | |||||
HGVSg | CHROMOSOME_X:g.4234199G>T | ||||
Sequence_details | SMap | S_parent | Sequence | W01H2 | |
Flanking_sequences | cttttcgcgttttttgttcgaggag | gaaaacatgtctaaagaagaaaaag | |||
Mapping_target | W01H2 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004285 | |||
Transcript | W01H2.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W01H2.3c.1:c.57+1557C>A | ||||
Intron_number | 1/6 | ||||
W01H2.3a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01H2.3a.2:c.-4+1557C>A | ||||
Intron_number | 1/8 | ||||
W01H2.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01H2.3a.1:c.-4+1157C>A | ||||
Intron_number | 2/9 | ||||
Remark | [20081124 db] this Variation was previously named hw101993 | ||||
Method | WGS_Hawaiian_Waterston |