WormBase Tree Display for Variation: WBVar00077626
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WBVar00077626 | Name | Public_name | WBVar00077626 | ||
---|---|---|---|---|---|
Other_name | haw101986 | ||||
cewivar00272438 | |||||
W01H2.3c.1:c.168+316C>A | |||||
W01H2.3a.1:c.108+316C>A | |||||
W01H2.3a.4:c.108+316C>A | |||||
W01H2.3a.3:c.108+316C>A | |||||
W01H2.3a.2:c.108+316C>A | |||||
W01H2.3b.1:c.204+316C>A | |||||
HGVSg | CHROMOSOME_X:g.4230784G>T | ||||
Sequence_details | SMap | S_parent | Sequence | W01H2 | |
Flanking_sequences | gaatttgaatttttttaaaaatatt | ttgaaaaacgtagaccttttttgaa | |||
Mapping_target | W01H2 | ||||
Type_of_mutation | Substitution | G | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004285 | |||
Transcript | W01H2.3a.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W01H2.3a.3:c.108+316C>A | ||||
Intron_number | 3/8 | ||||
W01H2.3c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01H2.3c.1:c.168+316C>A | ||||
Intron_number | 2/6 | ||||
W01H2.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01H2.3b.1:c.204+316C>A | ||||
Intron_number | 2/6 | ||||
W01H2.3a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01H2.3a.2:c.108+316C>A | ||||
Intron_number | 3/8 | ||||
W01H2.3a.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01H2.3a.4:c.108+316C>A | ||||
Intron_number | 2/7 | ||||
W01H2.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W01H2.3a.1:c.108+316C>A | ||||
Intron_number | 4/9 | ||||
Remark | [20081124 db] this Variation was previously named hw101986 | ||||
Method | WGS_Hawaiian_Waterston |