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WormBase Tree Display for Variation: WBVar00077626

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Name Class

WBVar00077626NamePublic_nameWBVar00077626
Other_namehaw101986
cewivar00272438
W01H2.3c.1:c.168+316C>A
W01H2.3a.1:c.108+316C>A
W01H2.3a.4:c.108+316C>A
W01H2.3a.3:c.108+316C>A
W01H2.3a.2:c.108+316C>A
W01H2.3b.1:c.204+316C>A
HGVSgCHROMOSOME_X:g.4230784G>T
Sequence_detailsSMapS_parentSequenceW01H2
Flanking_sequencesgaatttgaatttttttaaaaatattttgaaaaacgtagaccttttttgaa
Mapping_targetW01H2
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004285
TranscriptW01H2.3a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW01H2.3a.3:c.108+316C>A
Intron_number3/8
W01H2.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW01H2.3c.1:c.168+316C>A
Intron_number2/6
W01H2.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW01H2.3b.1:c.204+316C>A
Intron_number2/6
W01H2.3a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW01H2.3a.2:c.108+316C>A
Intron_number3/8
W01H2.3a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW01H2.3a.4:c.108+316C>A
Intron_number2/7
W01H2.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScW01H2.3a.1:c.108+316C>A
Intron_number4/9
Remark[20081124 db] this Variation was previously named hw101986
MethodWGS_Hawaiian_Waterston