WormBase Tree Display for Variation: WBVar00077407
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WBVar00077407 | Name | Public_name | WBVar00077407 | ||
---|---|---|---|---|---|
Other_name | haw101767 | ||||
cewivar00272163 | |||||
T06F4.1c.1:c.54-1890C>T | |||||
T06F4.1e.1:c.27-1890C>T | |||||
T06F4.1a.1:c.54-1890C>T | |||||
HGVSg | CHROMOSOME_X:g.4062925G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T06F4 | |
Flanking_sequences | taaaataggtccgtactgctttcaa | catacacacacgttttcaatccgaa | |||
Mapping_target | T06F4 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020294 | |||
Transcript | T06F4.1e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T06F4.1e.1:c.27-1890C>T | ||||
Intron_number | 1/6 | ||||
T06F4.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06F4.1a.1:c.54-1890C>T | ||||
Intron_number | 2/7 | ||||
T06F4.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06F4.1c.1:c.54-1890C>T | ||||
Intron_number | 2/8 | ||||
Remark | [20081124 db] this Variation was previously named hw101767 | ||||
Method | WGS_Hawaiian_Waterston |