WormBase Tree Display for Variation: WBVar00077314
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| WBVar00077314 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00077314 | |||
| Other_name | snp_T22B2[2] | ||||
| haw101674 | |||||
| cewivar00272049 | |||||
| T22B2.2.1:c.-129T>C | |||||
| HGVSg | CHROMOSOME_X:g.3921103T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | T22B2 | |
| Flanking_sequences | atggtttggaaagaagtattatcta | cgtgtcttcgaattacttgatttca | |||
| Mapping_target | T22B2 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar00246347 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00020666 | |||
| Transcript | T22B2.2.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T22B2.2.1:c.-129T>C | ||||
| cDNA_position | 195 | ||||
| Exon_number | 2/10 | ||||
| Reference | WBPaper00004703 | ||||
| Remark | [20081124 db] this Variation was previously named hw101674 | ||||
| Method | WGS_Hawaiian_Waterston |
