WormBase Tree Display for Variation: WBVar00077237
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| WBVar00077237 | Name | Public_name | WBVar00077237 | ||
|---|---|---|---|---|---|
| Other_name | haw101597 | ||||
| cewivar00271958 | |||||
| C01C4.3c.1:c.531+3531A>G | |||||
| C01C4.3a.3:c.-85+848A>G | |||||
| C01C4.3a.2:c.-2788A>G | |||||
| C01C4.3d.1:c.531+3531A>G | |||||
| C01C4.3a.1:c.-85+3531A>G | |||||
| C01C4.3f.1:c.678+3531A>G | |||||
| HGVSg | CHROMOSOME_X:g.3704293A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C01C4 | |
| Flanking_sequences | ttaaaaatttagttttgcttccatt | ataagattttcaaaaaaaaattgtt | |||
| Mapping_target | C01C4 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015293 | |||
| Transcript | C01C4.3d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C01C4.3d.1:c.531+3531A>G | ||||
| Intron_number | 5/12 | ||||
| C01C4.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C01C4.3a.1:c.-85+3531A>G | ||||
| Intron_number | 5/14 | ||||
| C01C4.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C01C4.3f.1:c.678+3531A>G | ||||
| Intron_number | 7/14 | ||||
| C01C4.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C01C4.3c.1:c.531+3531A>G | ||||
| Intron_number | 5/11 | ||||
| C01C4.3a.3 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C01C4.3a.3:c.-85+848A>G | ||||
| Intron_number | 1/10 | ||||
| C01C4.3a.2 | VEP_consequence | 5_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C01C4.3a.2:c.-2788A>G | ||||
| cDNA_position | 1068 | ||||
| Exon_number | 1/11 | ||||
| Remark | [20081124 db] this Variation was previously named hw101597 | ||||
| Method | WGS_Hawaiian_Waterston |
