WormBase Tree Display for Variation: WBVar00076386

WBVar00076386 Name: Public_name: WBVar00076386
    Other_name (11)
    HGVSg: CHROMOSOME_X:g.2699453C>T
  Sequence_details: SMap: S_parent: Sequence: T02C5
    Flanking_sequences: acagcgctattctatgtactatgat ttacttactttgcttttgttttcgg
    Mapping_target: T02C5
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022868 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022902 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00020160
    Transcript: T02C5.3g.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T02C5.3g.1:c.1280+9G>A
        Intron_number: 8/9
      T02C5.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T02C5.3a.1:c.1640+9G>A
        Intron_number: 11/12
      T02C5.3e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T02C5.3e.1:c.1493+9G>A
        Intron_number: 9/10
      T02C5.3d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T02C5.3d.1:c.1493+9G>A
        Intron_number: 9/10
      T02C5.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T02C5.3b.1:c.1640+9G>A
        Intron_number: 11/13
      T02C5.3f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T02C5.3f.1:c.1280+9G>A
        Intron_number: 8/9
      T02C5.3h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T02C5.3h.1:c.173+9G>A
        Intron_number: 2/3
      T02C5.3i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T02C5.3i.1:c.173+9G>A
        Intron_number: 2/3
      T02C5.3c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T02C5.3c.1:c.1640+9G>A
        Intron_number: 10/12
  Remark: [20081124 db] this Variation was previously named hw100746
  Method: WGS_Hawaiian_Waterston