WormBase Tree Display for Variation: WBVar00075288

WBVar00075288 Name: Public_name: WBVar00075288
    Other_name (11)
    HGVSg: CHROMOSOME_X:g.1552654T>A
  Sequence_details: SMap: S_parent: Sequence: K06A9
    Flanking_sequences: atcaggtagttcatctgctacttct taagtagcagttcccccgtcccatc
    Mapping_target: K06A9
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
      WBStrain00006622 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00019435
    Transcript: K06A9.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A9.1d.1:c.3532+1314T>A
        Intron_number: 7/12
      K06A9.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A9.1c.1:c.1894+1314T>A
        Intron_number: 8/14
      K06A9.1b.1 (12)
      K06A9.1g.1 (12)
      K06A9.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A9.1e.1:c.4279+567T>A
        Intron_number: 7/12
      K06A9.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A9.1f.1:c.4825+21T>A
        Intron_number: 7/12
      K06A9.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: K06A9.1a.1:c.2770+2076T>A
        Intron_number: 8/14
  Remark: [20081124 db] this Variation was previously named hw99648
  Method: WGS_Hawaiian_Waterston