WormBase Tree Display for Variation: WBVar00073969
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| WBVar00073969 | Name | Public_name | WBVar00073969 | ||
|---|---|---|---|---|---|
| Other_name | haw98329 | ||||
| cewivar00267432 | |||||
| T03D8.1e.1:c.936+575C>T | |||||
| T03D8.1d.1:c.1377+575C>T | |||||
| T03D8.1b.1:c.-46C>T | |||||
| T03D8.1c.1:c.978+575C>T | |||||
| T03D8.1a.1:c.1110+575C>T | |||||
| HGVSg | CHROMOSOME_V:g.20835569C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T03D8 | |
| Flanking_sequences | ccatttccctataacaaaaaagttc | ttatcaacatttctcctattttcac | |||
| Mapping_target | T03D8 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003830 | |||
| Transcript | T03D8.1a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T03D8.1a.1:c.1110+575C>T | ||||
| Intron_number | 5/8 | ||||
| T03D8.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T03D8.1d.1:c.1377+575C>T | ||||
| Intron_number | 7/9 | ||||
| T03D8.1b.1 | VEP_consequence | 5_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T03D8.1b.1:c.-46C>T | ||||
| cDNA_position | 1536 | ||||
| Exon_number | 4/9 | ||||
| T03D8.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T03D8.1e.1:c.936+575C>T | ||||
| Intron_number | 4/6 | ||||
| T03D8.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T03D8.1c.1:c.978+575C>T | ||||
| Intron_number | 5/7 | ||||
| Remark | [20081124 db] this Variation was previously named hw98329 | ||||
| Method | WGS_Hawaiian_Waterston |
