WormBase Tree Display for Variation: WBVar00073698
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WBVar00073698 | Name | Public_name | WBVar00073698 | ||
---|---|---|---|---|---|
Other_name | haw98058 | ||||
cewivar00056004 | |||||
CE47201:p.Ter204SerextTer22 | |||||
F46B3.14d.1:c.*6G>C | |||||
F46B3.14c.1:c.611G>C | |||||
HGVSg | CHROMOSOME_V:g.20630149C>G | ||||
Sequence_details | SMap | S_parent | Sequence | F46B3 | |
Flanking_sequences | ttatcacattggaattgtcatgctt | aaagattaaatagatttatgcaaaa | |||
Mapping_target | F46B3 | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (27) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00009765 | |||
Transcript | F46B3.14d.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F46B3.14d.1:c.*6G>C | ||||
cDNA_position | 587 | ||||
Exon_number | 10/10 | ||||
F46B3.14c.1 | VEP_consequence | stop_lost | |||
VEP_impact | HIGH | ||||
HGVSc | F46B3.14c.1:c.611G>C | ||||
HGVSp | CE47201:p.Ter204SerextTer22 | ||||
cDNA_position | 615 | ||||
CDS_position | 611 | ||||
Protein_position | 204 | ||||
Exon_number | 8/9 | ||||
Codon_change | tGa/tCa | ||||
Amino_acid_change | */S | ||||
Remark | [20081124 db] this Variation was previously named hw98058 | ||||
Method | WGS_Hawaiian_Waterston |