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WormBase Tree Display for Variation: WBVar00073449

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Name Class

WBVar00073449NamePublic_nameWBVar00073449
Other_namehaw97809
cewivar00266334
CE52948:p.Phe113=
F26F2.7d.1:c.-70T>C
F26F2.7c.1:c.339T>C
F26F2.7b.1:c.969T>C
CE19819:p.Phe321=
CE52915:p.Phe323=
F26F2.7a.1:c.963T>C
HGVSgCHROMOSOME_V:g.20584793T>C
Sequence_detailsSMapS_parentSequenceF26F2
Flanking_sequencestcctctacgcaacactacactcattctcgtaattctacaagccaccacac
Mapping_targetF26F2
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00009172
TranscriptF26F2.7b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF26F2.7b.1:c.969T>C
HGVSpCE52915:p.Phe323=
cDNA_position1020
CDS_position969
Protein_position323
Exon_number10/17
Codon_changettT/ttC
Amino_acid_changeF
F26F2.7d.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF26F2.7d.1:c.-70T>C
cDNA_position127
Exon_number1/9
F26F2.7c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF26F2.7c.1:c.339T>C
HGVSpCE52948:p.Phe113=
cDNA_position339
CDS_position339
Protein_position113
Exon_number3/9
Codon_changettT/ttC
Amino_acid_changeF
F26F2.7a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF26F2.7a.1:c.963T>C
HGVSpCE19819:p.Phe321=
cDNA_position1008
CDS_position963
Protein_position321
Exon_number10/17
Codon_changettT/ttC
Amino_acid_changeF
Remark[20081124 db] this Variation was previously named hw97809
MethodWGS_Hawaiian_Waterston