WormBase Tree Display for Variation: WBVar00071870

WBVar00071870 Name: Public_name: WBVar00071870
    Other_name: pas39411
      haw96230
      cewivar00053841
      Y60A3A.13c.1:c.246T>C
      CE26224:p.Cys112=
      Y60A3A.13a.1:c.336T>C
      CE45100:p.Cys82=
    HGVSg: CHROMOSOME_V:g.19906057A>G
  Sequence_details: SMap: S_parent: Sequence: Y60A3A
    Flanking_sequences: tagtgacgacacgaggctcggattc caaattgtgaagagtggcgagcgat
    Mapping_target: Y60A3A
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (19)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00227635
    Status: Live
  Affects: Gene: WBGene00305848
      WBGene00305852
      WBGene00305849
      WBGene00013361
      WBGene00305851
    Transcript: Y60A3A.41
      Y60A3A.38
      Y60A3A.13c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y60A3A.13c.1:c.246T>C
        HGVSp: CE45100:p.Cys82=
        cDNA_position: 246
        CDS_position: 246
        Protein_position: 82
        Exon_number: 3/9
        Codon_change: tgT/tgC
        Amino_acid_change: C
      Y60A3A.40
      Y60A3A.37
      Y60A3A.13a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y60A3A.13a.1:c.336T>C
        HGVSp: CE26224:p.Cys112=
        cDNA_position: 337
        CDS_position: 336
        Protein_position: 112
        Exon_number: 4/11
        Codon_change: tgT/tgC
        Amino_acid_change: C
  Remark: [20081124 db] this Variation was previously named hw96230
  Method: WGS_Hawaiian_Waterston