WormBase Tree Display for Variation: WBVar00071857
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WBVar00071857 | Name | Public_name | WBVar00071857 | ||
---|---|---|---|---|---|
Other_name | haw96217 | ||||
Y60A3A.13c.1:c.486+100T>G | |||||
Y60A3A.13a.1:c.576+100T>G | |||||
HGVSg | CHROMOSOME_V:g.19905004A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y60A3A | |
Flanking_sequences | ggcttggcagcgtaaaaaaaagtttatcgttttttttggaaatttattgatttttttgggaatttattgatttttttggaaatttattgatttttttggaaatttattgatttttctgtaattttatcgatttttctggaaatttattgattttctggaaatttattgattttctggaaatttattg | tctttctggaaatttattgattttt | |||
Mapping_target | Y60A3A | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Status | Live | ||||
Affects | Gene | WBGene00013361 | |||
Transcript | Y60A3A.13c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y60A3A.13c.1:c.486+100T>G | ||||
Intron_number | 4/8 | ||||
Y60A3A.13a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y60A3A.13a.1:c.576+100T>G | ||||
Intron_number | 5/10 | ||||
Remark | [20081124 db] this Variation was previously named hw96217 | ||||
Method | WGS_Hawaiian_Waterston |