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WormBase Tree Display for Variation: WBVar00071794

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Name Class

WBVar00071794NamePublic_nameWBVar00071794
Other_namehaw96154
cewivar00113989
Y116F11B.12b.1:c.1359-1542A>T
Y116F11B.12a.1:c.1359-1016A>T
Y116F11B.12c.1:c.1359-628A>T
Y116F11B.13.1:c.168+611T>A
Y116F11B.12a.2:c.1359-1016A>T
HGVSgCHROMOSOME_V:g.19884063T>A
Sequence_detailsSMapS_parentSequenceY116F11B
Flanking_sequencesaatttgaaaaaagttcaggaactagcctgagctcgaaattcttcaaattt
Mapping_targetY116F11B
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (25)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001629
WBGene00013828
TranscriptY116F11B.12b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12b.1:c.1359-1542A>T
Intron_number6/7
Y116F11B.12a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12a.2:c.1359-1016A>T
Intron_number7/10
Y116F11B.12a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12a.1:c.1359-1016A>T
Intron_number8/11
Y116F11B.13.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.13.1:c.168+611T>A
Intron_number2/3
Y116F11B.12c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY116F11B.12c.1:c.1359-628A>T
Intron_number6/6
Remark[20081124 db] this Variation was previously named hw96154
MethodWGS_Hawaiian_Waterston