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WormBase Tree Display for Variation: WBVar00071087

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Name Class

WBVar00071087EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00071087
Other_namepas39052
snp_Y43F8C[3]
haw95447
cewivar00052611
B0399.1e.1:c.221+1869G>A
B0399.1f.1:c.473+1869G>A
B0399.1d.1:c.428+1869G>A
B0399.1a.1:c.764+1869G>A
B0399.1b.1:c.623+1869G>A
HGVSgCHROMOSOME_V:g.19598462G>A
Sequence_detailsSMapS_parentSequenceY43F8C
Flanking_sequencestttaatctaattcagatttttataatttgtgacgatttttttcaataaaa
Mapping_targetY43F8C
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (32)
LaboratoryRW
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
SNP_Wicks
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar00247191
WBVar00227276
StatusLive
AffectsGeneWBGene00007176
TranscriptB0399.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1b.1:c.623+1869G>A
Intron_number6/14
B0399.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1d.1:c.428+1869G>A
Intron_number2/9
B0399.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1f.1:c.473+1869G>A
Intron_number5/12
B0399.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1a.1:c.764+1869G>A
Intron_number6/14
B0399.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScB0399.1e.1:c.221+1869G>A
Intron_number3/11
ReferenceWBPaper00004703
Remark[20081124 db] this Variation was previously named hw95447
MethodWGS_Hawaiian_Waterston