WormBase Tree Display for Variation: WBVar00070941

WBVar00070941 Name: Public_name: WBVar00070941
    Other_name (18)
    HGVSg: CHROMOSOME_V:g.19510102T>C
  Sequence_details: SMap: S_parent: Sequence: Y43F8B
    Flanking_sequences: ggcttaagggaaactcgaacaactt aagtcccaggaagactgcgaaaagg
    Mapping_target: Y43F8B
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (34)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson6900
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00227119
    Status: Live
  Affects: Gene: WBGene00012814
    Transcript: Y43F8B.3b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y43F8B.3b.1:c.1758T>C
        HGVSp: CE46723:p.Phe586=
        cDNA_position: 1758
        CDS_position: 1758
        Protein_position: 586
        Exon_number: 9/20
        Codon_change: ttT/ttC
        Amino_acid_change: F
      Y43F8B.3g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y43F8B.3g.1:c.2007T>C
        HGVSp: CE46783:p.Phe669=
        cDNA_position: 2007
        CDS_position: 2007
        Protein_position: 669
        Exon_number: 9/19
        Codon_change: ttT/ttC
        Amino_acid_change: F
      Y43F8B.3e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y43F8B.3e.1:c.1593T>C
        HGVSp: CE46657:p.Phe531=
        cDNA_position: 1597
        CDS_position: 1593
        Protein_position: 531
        Exon_number: 9/16
        Codon_change: ttT/ttC
        Amino_acid_change: F
      Y43F8B.3h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y43F8B.3h.1:c.829+2268T>C
        Intron_number: 7/16
      Y43F8B.3d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y43F8B.3d.1:c.1758T>C
        HGVSp: CE46561:p.Phe586=
        cDNA_position: 1758
        CDS_position: 1758
        Protein_position: 586
        Exon_number: 9/22
        Codon_change: ttT/ttC
        Amino_acid_change: F
      Y43F8B.3a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y43F8B.3a.1:c.1758T>C
        HGVSp: CE46772:p.Phe586=
        cDNA_position: 1762
        CDS_position: 1758
        Protein_position: 586
        Exon_number: 10/18
        Codon_change: ttT/ttC
        Amino_acid_change: F
      Y43F8B.3c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y43F8B.3c.1:c.1758T>C
        HGVSp: CE46751:p.Phe586=
        cDNA_position: 1769
        CDS_position: 1758
        Protein_position: 586
        Exon_number: 10/21
        Codon_change: ttT/ttC
        Amino_acid_change: F
      Y43F8B.3f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y43F8B.3f.1:c.1593T>C
        HGVSp: CE46591:p.Phe531=
        cDNA_position: 1599
        CDS_position: 1593
        Protein_position: 531
        Exon_number: 9/20
        Codon_change: ttT/ttC
        Amino_acid_change: F
  Remark: [20081124 db] this Variation was previously named hw95301
  Method: WGS_Hawaiian_Waterston