WormBase Tree Display for Variation: WBVar00068482
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WBVar00068482 | Name | Public_name | WBVar00068482 | ||
---|---|---|---|---|---|
Other_name | haw94794 | ||||
cewivar00262931 | |||||
CE46250:p.Ser3= | |||||
F55C9.11.1:c.*322C>T | |||||
F55C9.15.1:c.9C>T | |||||
HGVSg | CHROMOSOME_V:g.19306998G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F55C9 | |
Flanking_sequences | caacaatcaatctctggcagtgtga | ctcaacattgagcggtatcctttga | |||
Mapping_target | F55C9 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00206500 | |||
WBGene00010107 | |||||
Transcript | F55C9.15.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F55C9.15.1:c.9C>T | ||||
HGVSp | CE46250:p.Ser3= | ||||
cDNA_position | 9 | ||||
CDS_position | 9 | ||||
Protein_position | 3 | ||||
Exon_number | 1/1 | ||||
Codon_change | agC/agT | ||||
Amino_acid_change | S | ||||
F55C9.11.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F55C9.11.1:c.*322C>T | ||||
cDNA_position | 2559 | ||||
Exon_number | 6/6 | ||||
Remark | [20081124 db] this Variation was previously named hw94794 | ||||
Method | WGS_Hawaiian_Waterston |