WormBase Tree Display for Variation: WBVar00068175
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| WBVar00068175 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00068175 | |||
| Other_name | pas25232 | ||||
| snp_ZK455[1] | |||||
| haw107485 | |||||
| cewivar00061887 | |||||
| ZK455.8a.1:c.231A>G | |||||
| CE31675:p.Ser77= | |||||
| HGVSg | CHROMOSOME_X:g.11346776A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | ZK455 | |
| Flanking_sequences | tgatgagcctccaacagaagaacaagaattagataaagaaacagaagtaaaagatgactctttacctcacacattgaatatcgaaaatcatgctgttaaacaaccattccttgcttcaactcatcttcctattagggtaagaactttttatttaaaaacagaaaaatacgattataaaaatatttccaagatcaaattgacatcagaactgactattacttttcagagcgaaaccgatctcatttcgaacatttctgcaagttccatgatgcccctcgaaaatcatccacttatatattc | aatccagaatttacgacagttcggttcttgactcctcaagcaagtgttcaaacggtaaatgctggagctgcaagtgttgcgcccagcgaagcatctgtaaatgcggaaaactcaagaaagccatcgtaagttgttgtattgtagtttatacgcttctttggagttttaaggaaagcacgattacaaagtgaaatggaaattcgaaatcaacattatcaaaaacaaaagcaatacgcttcgactaaagaaacacgggcaaagcgattaactgatatcgactttgaaggtaagtaaaaactc | |||
| Mapping_target | ZK455 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (32) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00083125 | |||
| WBVar00248548 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003843 | |||
| Transcript | ZK455.8a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | ZK455.8a.1:c.231A>G | ||||
| HGVSp | CE31675:p.Ser77= | ||||
| cDNA_position | 232 | ||||
| CDS_position | 231 | ||||
| Protein_position | 77 | ||||
| Exon_number | 3/15 | ||||
| Codon_change | tcA/tcG | ||||
| Amino_acid_change | S | ||||
| Reference | WBPaper00004703 | ||||
| Method | WGS_Pasadena_Quinlan |
