WormBase Tree Display for Variation: WBVar00067298
expand all nodes | collapse all nodes | view schema
WBVar00067298 | Name | Public_name | WBVar00067298 | ||
---|---|---|---|---|---|
Other_name | haw44581 | ||||
haw144320 | |||||
cewivar00197127 | |||||
C06G4.2c.1:c.102+36A>T | |||||
C06G4.2d.1:c.102+36A>T | |||||
C06G4.2a.2:c.102+36A>T | |||||
C06G4.2a.1:c.102+36A>T | |||||
C06G4.2b.2:c.102+36A>T | |||||
C06G4.2b.1:c.102+36A>T | |||||
HGVSg | CHROMOSOME_III:g.7981306A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C06G4 | |
Flanking_sequences | tttttggttagaatatttttttttt | aatttgctacatagacatgttgaaa | |||
Mapping_target | C06G4 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (42) | |||||
Laboratory | RW | ||||
QX | |||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01331355 | |||
WBVar00564185 | |||||
WBVar01446952 | |||||
Status | Live | ||||
Affects | Gene | WBGene00000542 | |||
Transcript | C06G4.2d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C06G4.2d.1:c.102+36A>T | ||||
Intron_number | 1/14 | ||||
C06G4.2a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C06G4.2a.2:c.102+36A>T | ||||
Intron_number | 3/16 | ||||
C06G4.2c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C06G4.2c.1:c.102+36A>T | ||||
Intron_number | 2/14 | ||||
C06G4.2b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C06G4.2b.2:c.102+36A>T | ||||
Intron_number | 2/16 | ||||
C06G4.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C06G4.2a.1:c.102+36A>T | ||||
Intron_number | 2/15 | ||||
C06G4.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C06G4.2b.1:c.102+36A>T | ||||
Intron_number | 2/15 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00040707 | |||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw44581 | ||||
Method | WGS_Hawaiian_Waterston |