WormBase Tree Display for Variation: WBVar00067190
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WBVar00067190 | Name | Public_name | WBVar00067190 | ||
---|---|---|---|---|---|
Other_name | pas25035 | ||||
uCE3-1088 | |||||
haw144624 | |||||
cewivar00108710 | |||||
ZK643.1c.1:c.46-579C>G | |||||
ZK643.1a.1:c.97-579C>G | |||||
ZK643.1d.1:c.85-579C>G | |||||
HGVSg | CHROMOSOME_III:g.8933656C>G | ||||
Sequence_details | SMap | S_parent | Sequence | ZK643 | |
Flanking_sequences | gggttagttttacactgtaaatttgtatcacggggacatgtccccgctccccatatcggagggcgaagaagcgtccccgttctatatggggacaaagttcattccaatattcattttattaatgtagttctgcagaagctaatgaatggtaaactatcaccaaaaatgtatataagaaatcagataaccatttttaagctagagatccaacatctaatctgagttaaacgtctccaatttcttgccacttttgttttccaatctaatggaaaaatgtctactctgcttctccagctgatt | agcaaaaacctcttgcctattttttctgctgcagcagcacaattttatattatccaattccccctatctagatcttattcttattcgttgccatttctgaaaatgaataaattggttcgcaggataactggaagaaaaagagagttttgttccgggagcacaccgaaaagcatgaaggttacagagccaaggagacgcagatcttctatctctgaatctcttcgtcttctattgtattttgtgttaaagtatgtatgggggtgccccctggatattactgctcatttttcattttgtgtc | |||
Mapping_target | ZK643 | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (31) | |||||
Laboratory | AX | ||||
Person | WBPerson6900 | ||||
WBPerson4037 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Swan | |||||
History | Acquires_merge | WBVar00269921 | |||
WBVar01331791 | |||||
WBVar00564489 | |||||
WBVar01266786 | |||||
Status | Live | ||||
Affects | Gene | WBGene00014033 | |||
Transcript | ZK643.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK643.1a.1:c.97-579C>G | ||||
Intron_number | 2/9 | ||||
ZK643.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK643.1d.1:c.85-579C>G | ||||
Intron_number | 2/9 | ||||
ZK643.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZK643.1c.1:c.46-579C>G | ||||
Intron_number | 2/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
WBPaper00005369 | |||||
Method | WGS_Pasadena_Quinlan |