WormBase Tree Display for Variation: WBVar00065978
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| WBVar00065978 | Name | Public_name | WBVar00065978 | ||
|---|---|---|---|---|---|
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_III:g.7640016T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | ZK783 | |
| Flanking_sequences | tttggcgctttttgcatcaaaaata | tctgttcaaaaagcgagaaagagcg | |||
| Mapping_target | ZK783 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (36) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01330996 | |||
| WBVar00564003 | |||||
| WBVar01265672 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022816 | |||
| Transcript | ZK783.1f.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1f.1:c.7857+152T>C | ||||
| Intron_number | 22/22 | ||||
| ZK783.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1g.1:c.7716+152T>C | ||||
| Intron_number | 21/22 | ||||
| ZK783.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1h.1:c.7791+152T>C | ||||
| Intron_number | 21/21 | ||||
| ZK783.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1d.1:c.7950+152T>C | ||||
| Intron_number | 22/22 | ||||
| ZK783.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1e.1:c.7809+152T>C | ||||
| Intron_number | 21/22 | ||||
| ZK783.1k.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1k.1:c.8091+152T>C | ||||
| Intron_number | 24/24 | ||||
| ZK783.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1a.1:c.8085+152T>C | ||||
| Intron_number | 24/25 | ||||
| ZK783.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | ZK783.1b.1:c.8016+152T>C | ||||
| Intron_number | 23/24 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw44317 | ||||
| Method | WGS_Hawaiian_Waterston |
