WormBase Tree Display for Variation: WBVar00065629
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WBVar00065629 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00065629 | |||
Other_name | pas24723 | ||||
haw144466 | |||||
cewivar00108176 | |||||
CE48856:p.Ile100Thr | |||||
ZC21.3b.1:c.97+277T>C | |||||
ZC21.3d.1:c.97+277T>C | |||||
ZC21.3c.1:c.299T>C | |||||
ZC21.3e.1:c.97+277T>C | |||||
HGVSg | CHROMOSOME_III:g.8525746T>C | ||||
Sequence_details | SMap | S_parent | Sequence | ZC21 | |
Flanking_sequences | cctgcaacaccaactcgaattatggtaagtatatagcctccaaatatcaaacaattttccataacactctataataatcaatattaacaattaacacagataacactcaccaacgatacaaacggcagcaatcatacaattctcaccaagtgccaggttttcttcctaacacttatcaaccggatgcattttcttctgattctatacgtcaggagacacttcgattaaatcaagcattctttgattcacttacacaaacagcttcaccactttccatgcaatcatcccaatctgatccaa | tctaacttctcaaatggattcacaaccaattcacatccaaactaatgctcaatcagaacccccgtatcatcatacattcaaaaatcgtccgatcccaattgtatttgctgatccggaggatacgaagcatcgtgatccaacaatattcgtagaagtacatggcgatgattcaaacacaactaccaagagctcaccaaccctagaattcgttcaattcaccctagaacctcctagtgctgatggcacaatttatcaagcgacacaaggaaatgagccaagctttttcgagtcagaagccac | |||
Mapping_target | ZC21 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (26) | |||||
Person | WBPerson6900 | ||||
WBPerson4037 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00564331 | |||
Status | Live | ||||
Affects | Gene | WBGene00022505 | |||
Transcript | ZC21.3b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZC21.3b.1:c.97+277T>C | ||||
Intron_number | 3/4 | ||||
ZC21.3c.1 (12) | |||||
ZC21.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC21.3d.1:c.97+277T>C | ||||
Intron_number | 3/4 | ||||
ZC21.3e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | ZC21.3e.1:c.97+277T>C | ||||
Intron_number | 3/5 | ||||
Reference | WBPaper00038208 | ||||
Method | WGS_Pasadena_Quinlan |